Methods to handle large genomic data sets

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Carl Kingsford
Herbert A. Simon Professor of Computer Science

Publications

(2017). Improved search of large transcriptomic sequencing databases using split sequence bloom trees. International Conference on Research in Computational Molecular Biology, pages 257-271.

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(2016). Compact universal k-mer hitting sets. International Workshop on Algorithms in Bioinformatics, pages 257-268.

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(2015). Rapid, separable compression enables fast analyses of sequence alignments. Proceedings of the 6th ACM Conference on Bioinformatics, Computational Biology and Health Informatics, pages 194-201.

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