Courses taught at Carnegie Mellon University

Algorithms classes:

Fall 2024: 02-[46]14 String Algorithms
Fall 2023: 02-[46]14 String Algorithms
Fall 2022: 02-[46]14 String Algorithms
Fall 2020: 15-351 Algorithms and Advanced Data Structures (with Jian Ma)
Spring 2020: 02-414, String Algorithms
Fall 2018: 15-451, Algorithms (with Danny Sleator)
Fall 2017: 15-451, Algorithms (with Danny Sleator)
Fall 2016: 15-451, Algorithms (with Danny Sleator)
Fall 2015: 15-351, Algorithms and Advanced Data Structures
Fall 2014: 15-351, Algorithms and Advanced Data Structures
Spring 2014: 02-713, Algorithms & Data Structures for Scientists
Fall 2013: 02-714, String Algorithms
Spring 2013: 02-713, Algorithms & Data Structures for Scientists

Programming classes:

Fall 2021: 02-601, Programming for Scientists
Fall 2015: 02-201, Programming for Scientists
Fall 2014: 02-201, Programming for Scientists

Other classes:

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Courses taught at University of Maryland, College Park

Fall 2011: CMSC 858S/701, Computational Genomics
Fall 2011: CMSC 423, Bioinformatics
Spring 2011: CMSC 858M, Computational Evolutionary Dynamics
Fall 2010: CMSC 423, Bioinformatics
Fall 2009: CMSC 858L, Networks Algorithms for Biology
Fall 2009: CMSC 451, Design & Analysis of Computer Algorithms
Spring 2009: CMSC 858L, Graphs and Networks in Computational Biology
Fall 2008: CMSC 451, Design & Analysis of Computer Algorithms
Spring 2008: CMSC 420, Data Structures
Fall 2007: CMSC 858L, Graphs and Networks in Computational Biology

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Bioinformatics Lecture Slides

All slides by Carl Kingsford unless noted. Often the material for a lecture was derived from some source material that is cited in each PDF file.

Introduction to Computers and Biology

Exact String Search

Dynamic Programming & Sequence Alignment

Genome Sequencing & Assembly

Data Structures for String Queries

Structural Biology

Pattern Discovery

Phylogenetics

Phylogenetics

Clustering Biological Networks

Aligning Biological Networks

Random Models of Network Evolution

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CS Background Lecture Slides

All slides by Carl Kingsford unless noted. Often the material for a lecture was derived from some source material that is cited in each PDF file.

Kingsford Group - Teaching

Courses taught at Carnegie Mellon University

Algorithms classes:

Programming classes:

Other classes:

Courses taught at University of Maryland, College Park

Bioinformatics Lecture Slides

Introduction to Computers and Biology

Exact String Search

Dynamic Programming & Sequence Alignment

Genome Sequencing & Assembly

Data Structures for String Queries

Structural Biology

Pattern Discovery

Phylogenetics

Clustering Biological Networks

Aligning Biological Networks

Random Models of Network Evolution

CS Background Lecture Slides

Basic Data Structures

Other Data Structures

Interval & Spatial Data Structures

Programming Languages

Network Flow Algorithms

The Theory of NP-Completeness